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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs11812523 chr10:915638 C/T 4.8E-6 407 15.13 17.38 10.57 KM Plot
LGG rs11812594 chr10:68711902 C/T 3.04E-12 407 15.78 11.98 8.97 KM Plot
LGG rs11813210 chr10:919796 G/A 2.55E-6 406 15.13 17.73 10.57 KM Plot
LGG rs118134136 chr9:95529196 C/A 0.000155 406 15.17 17.7 7.12 KM Plot
LGG rs11815185 chr10:923617 T/A 2.55E-6 406 15.17 17.38 10.57 KM Plot
LGG rs11815788 chr10:122684094 G/C 6.86E-5 404 16.27 14.7 17.67 KM Plot
LGG rs11815922 chr10:81688079 G/A 5.98E-5 404 15.3 13.13 21.82 KM Plot
LGG rs11816064 chr10:931176 A/C 4.7E-6 407 15.17 17.03 10.57 KM Plot
LGG rs11818288 chr10:905050 A/C 2.69E-6 404 15.17 17.73 10.57 KM Plot
LGG rs11818325 chr10:879756 G/A 3.62E-5 407 15.13 17.73 12.17 KM Plot
LGG rs11836451 chr12:132632910 T/G 0.000127 400 16.25 13.2 8.03 KM Plot
LGG rs11852507 chr15:31971572 A/G 0.000122 403 15.95 14.87 11.8 KM Plot
LGG rs11856520 chr15:31905145 T/C 4.87E-5 405 15.27 15.45 14.77 KM Plot
LGG rs11860837 chr16:67480263 A/G 9.13E-6 406 15.2 15.25 19.2 KM Plot
LGG rs11861657 chr16:67824395 A/G 4.85E-11 407 15.17 18.97 6.47 KM Plot